Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • JH_Reading
    Junior Member
    • Jul 2017
    • 1

    #1

    RPy issue in Galaxy on Biolinux 8

    Hi,

    I am using Galaxy in BioLinux8 and having a consistent issue with RPy e.g.

    Traceback (most recent call last):
    File "/usr/lib/galaxy-server/tools/plotting/histogram.py", line 5, in <module>
    from rpy import *
    File "/usr/lib/python2.7/dist-packages/rpy.py", line 134, in <module>
    """ % RVERSION)
    RuntimeError: No module named _rpy3030

    RPy module can not be imported. Please check if your rpy
    installation supports R 3.3.0. If you have multiple R versions
    installed, you may need to set RHOME before importing rpy. For
    example:

    >>> from rpy_options import set_options
    >>> set_options(RHOME='c:/progra~1/r/rw2011/')
    >>> from rpy import *

    As a biologist, could any offer a simple solution to this?

    Many thanks,

    John Hammond
    University of Reading, UK

Latest Articles

Collapse

  • SEQadmin2
    Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
    by SEQadmin2



    Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

    Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
    ...
    10-14-2026, 09:55 AM
  • SEQadmin2
    New Genomics Technologies Take Aim at Long-Standing Limits
    by SEQadmin2


    Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.

    We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing
    ...
    09-28-2026, 10:25 AM

ad_right_rmr

Collapse

News

Collapse

Topics Statistics Last Post
Started by SEQadmin2, Yesterday, 11:13 AM
0 responses
17 views
0 reactions
Last Post SEQadmin2  
Started by SEQadmin2, Yesterday, 10:48 AM
0 responses
18 views
0 reactions
Last Post SEQadmin2  
Started by SEQadmin2, 10-15-2026, 10:52 AM
0 responses
36 views
0 reactions
Last Post SEQadmin2  
Started by SEQadmin2, 10-14-2026, 05:39 AM
0 responses
42 views
0 reactions
Last Post SEQadmin2  
Working...