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Training in Variant Analysis
Feb 27 - Mar 2, 2018
Where?
National Institutes of Health
9000 Rockville Pike
Bethesda, MD 20892, USA
Objectives
Participants will use popular open source tools and techniques necessary for analysing variants starting from raw data quality control. Apart from the regular analysis like alignment, variant calling and annotation, this training will walk through participants in several advanced variant analysis methods and techniques.
Highlights
Hands-on Skills/Tools taught
For more information and registration, please visit the following page;
Information and Registration
.
.
Feb 27 - Mar 2, 2018
Where?
National Institutes of Health
9000 Rockville Pike
Bethesda, MD 20892, USA
Objectives
Participants will use popular open source tools and techniques necessary for analysing variants starting from raw data quality control. Apart from the regular analysis like alignment, variant calling and annotation, this training will walk through participants in several advanced variant analysis methods and techniques.
Highlights
- Cloud-based Linux desktop
- Cloud image freely provided to participants
- Training provided by active NIH researchers
- Cookbook style bound manual for all exercises
- Direct, after training support through exclusive forum membership
- Continuing Educational Credits
Hands-on Skills/Tools taught
- NGS Basics, experimental design, data format
- Data quality control, preprocessing and alignment
- Germline variant calling
- Somatic variant calling
- Variant score recalibration and filtering
- Variant calling best practices
- Indels, structural and copy-number variation
- Cohort and population scale analysis
- Recombination, linkage, LOH, haplotype, allelic imbalance
- Variant annotation and association analysis
- Co-variation, causal variation, network analysis
For more information and registration, please visit the following page;
Information and Registration
.
.