A Problem with Shory
Have everyone installed the assembly software for SOLID data-Shorty on Ubuntu? A error occurs:"configuration file needed" in this step-./build conf/conf-file bin/shorty-assembler, can anyone give me a hand?
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Yes, I'm trying it.. as conf-file you have to choose from these three options:Originally posted by michael_0214 View Post
'ab-strict' : Used for ABI Solid Data (it would be conf/ab-strict)
'helicos-strict' : Used for Helicos data (it would be conf/helicos-strict)
'solexa-strict' : Used for Illumina/Solexa data (it would be conf/solexa-strict)
When executing the build command, g++ does severeal things but stops with an error:
g++: ../obj/shorty_string.o : No such file or directory
All other needed *.o-files are generated automatically, except shorty_string.o
Does anyone know how to solve this problem? I already tried to copy another shorty-string.o from the ../src directory into ../obj but then there are a lot of undefined references..Last edited by Jenzo; 03-15-2011, 11:46 PM. -
Solved: Before building we deleted ../src/shorty-string.o - after that everything was fine. Works also on 64-bit architecture.Originally posted by Jenzo View PostComment
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