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Anyone knows how to get the CDS position of each gene, on HG18?
Note that it is for each gene, instead of each transcript
Note that it is for each gene, instead of each transcript
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gene expression is equal to CDS of transcript. You need to see information of each transcript of gene.Originally posted by ahli1981 View Post -
You should be able to get them from the UCSD Genomes browser tables (http://genome.ucsc.edu/cgi-bin/hgTables?command=start).
Alternatively, you can extract the information from the annotations available at the NCBI FTP (ftp://ftp.ncbi.nih.gov/genomes/H_sap...romosomes/gbs/). I should note that those annotations are not for the HG18 version, but the latest release.Comment
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thanks robsComment
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