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  • deMan
    Junior Member
    • Oct 2009
    • 3

    #1

    GFF 2 genbank converter

    Is there an easy way to convert gff + fasta files to genbank files?
  • maubp
    Peter (Biopython etc)
    • Jul 2009
    • 1544

    #2
    No, just various levels of hassle. GFF (even GFF3) is very broad and can include all sorts of things which don't simple map onto the relatively narrow and proscribed GenBank format.

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    • deMan
      Junior Member
      • Oct 2009
      • 3

      #3
      But it should be possible for a GFF file holding only CDS regions isn't it?

      Comment

      • maubp
        Peter (Biopython etc)
        • Jul 2009
        • 1544

        #4
        If your GFF file has CDS regions then it is certainly possible. I think there are some BioPerl based scripts that can do this...

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