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  • deMan
    Junior Member
    • Oct 2009
    • 3

    #1

    GFF 2 genbank converter

    Is there an easy way to convert gff + fasta files to genbank files?
  • maubp
    Peter (Biopython etc)
    • Jul 2009
    • 1544

    #2
    No, just various levels of hassle. GFF (even GFF3) is very broad and can include all sorts of things which don't simple map onto the relatively narrow and proscribed GenBank format.

    Comment

    • deMan
      Junior Member
      • Oct 2009
      • 3

      #3
      But it should be possible for a GFF file holding only CDS regions isn't it?

      Comment

      • maubp
        Peter (Biopython etc)
        • Jul 2009
        • 1544

        #4
        If your GFF file has CDS regions then it is certainly possible. I think there are some BioPerl based scripts that can do this...

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