Questions:
• How did you make a relational database for you genomic information/analysis results?
• How long did it take you to design and implement?
• Could someone comfortable with programming but without much experience do it, or does it require a pro?
After just a few months of NGS analysis, I am swimming in results: GFF files with all the information/annotations about the reference genomes, VCF files of indels and SNPs, snpEff-annotated VCF results, SMART annotated protein sequence results. But these are all flat files. I believe, at this point, a relational database is needed.
• How did you make a relational database for you genomic information/analysis results?
• How long did it take you to design and implement?
• Could someone comfortable with programming but without much experience do it, or does it require a pro?
After just a few months of NGS analysis, I am swimming in results: GFF files with all the information/annotations about the reference genomes, VCF files of indels and SNPs, snpEff-annotated VCF results, SMART annotated protein sequence results. But these are all flat files. I believe, at this point, a relational database is needed.
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