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Old 01-16-2013, 07:23 AM   #1
stepa_t
Junior Member
 
Location: Kaliningrad

Join Date: Jan 2013
Posts: 7
Default Reptile error correction tool: fastq not readable

Dear all!
I've tried to use Reprile error correction tool ( http://aluru-sun.ece.iastate.edu/doku.php?id=reptile ) for my MiSeq reads, but unfortunately this soft cannot read my fastq file, despite this file was OK with FastQC and different assemblers. Do you know if there is any modification in fastq format in MiSeq versus other Illumina sequencers, since supposedly it was tested only on GA data? Is there any FastQ file converters?
TIA
Stepan
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