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Old 07-15-2008, 08:19 AM   #11
ECO
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Location: SF Bay Area, CA, USA

Join Date: Oct 2007
Posts: 1,358
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Quote:
Originally Posted by jjcook View Post
You can remove "-static" from the FLAGS= line in the makefile
Thanks JJcook...that worked a treat. I have another problem with this one, this time on openSUSE11:

Code:
ericbox:/home/eco/dl/soap_1.10 # make
g++ -static -DMAXGAP=3 -DMAXHITS=10000 -DTHREAD -O3   -DDB_CHR -DREAD_60  -c main.cpp -o main.chr.o
In file included from main.cpp:11:
align.h: In member function ‘void SingleAlign::Reverse_Seq()’:
align.h:286: error: ‘reverse’ was not declared in this scope
align.h: In member function ‘void SingleAlign::Reverse_Qual()’:
align.h:294: error: ‘reverse’ was not declared in this scope
main.cpp: In function ‘void usage()’:
main.cpp:294: error: ‘exit’ was not declared in this scope
main.cpp: In function ‘int mGetOptions(int, char**)’:
main.cpp:308: error: ‘atoi’ was not declared in this scope
main.cpp: In function ‘void RunProcess()’:
main.cpp:348: error: ‘exit’ was not declared in this scope
main.cpp:353: error: ‘exit’ was not declared in this scope
main.cpp:358: error: ‘exit’ was not declared in this scope
main.cpp:363: error: ‘exit’ was not declared in this scope
main.cpp:385: error: ‘exit’ was not declared in this scope
main.cpp:391: error: ‘exit’ was not declared in this scope
main.cpp:398: error: ‘exit’ was not declared in this scope
main.cpp: In function ‘int main(int, char**)’:
main.cpp:428: error: ‘exit’ was not declared in this scope
make: *** [main.chr.o] Error 1

Last edited by ECO; 07-15-2008 at 09:05 PM. Reason: to follow up on the OSX change working...
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