Hi all,
Relatively new to all this, I tried progressiveMauve to align more than >25 bacterial genomes and it repeatedly crashed after a few hours. When I align ~10 it works perfectly. I was told by other members of my lab that mauve tends to not work so much with a larger number of genomes.
The question may seem trivial to most of you, sorry in advance, but which genome alignment tool would you use to do this? Still, I like mauve; so would there be a way for it to work with a larger number of genomes?
Thanks for your time and help!
Best,
G
Relatively new to all this, I tried progressiveMauve to align more than >25 bacterial genomes and it repeatedly crashed after a few hours. When I align ~10 it works perfectly. I was told by other members of my lab that mauve tends to not work so much with a larger number of genomes.
The question may seem trivial to most of you, sorry in advance, but which genome alignment tool would you use to do this? Still, I like mauve; so would there be a way for it to work with a larger number of genomes?
Thanks for your time and help!
Best,
G
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