Hello.
I thank you in advance. I am just interested in finding the DNA copy number from whole DNA sequencing.
note, i am not interested yet in creating SEG files from the circular binary algorithm yet. just need copy number information similar to slide 4 from
I am using IGV software, and their website at Broad only mentions the creation of SEG files.
yet , i am aware that from the correct interpretation of IGV one can "eyeball" The DNA copy number.
I am not interested yet in copy number variants, but just the copy number.
I am not sure if the copy number is the same as the count number.
I am not sure if there is software that can calculate the DNA copy number.
From IGV I can not determine the copy number .... here are some images that I am examining, and am just looking for general advice
I thank you in advance. I am just interested in finding the DNA copy number from whole DNA sequencing.
note, i am not interested yet in creating SEG files from the circular binary algorithm yet. just need copy number information similar to slide 4 from
I am using IGV software, and their website at Broad only mentions the creation of SEG files.
yet , i am aware that from the correct interpretation of IGV one can "eyeball" The DNA copy number.
I am not interested yet in copy number variants, but just the copy number.
I am not sure if the copy number is the same as the count number.
I am not sure if there is software that can calculate the DNA copy number.
From IGV I can not determine the copy number .... here are some images that I am examining, and am just looking for general advice