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Old 04-08-2016, 05:29 AM   #3
stianlagstad
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Location: Oslo

Join Date: Apr 2015
Posts: 7
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Quote:
Originally Posted by ymc View Post
FusionMap can also work on genomic DNA sequences. I am not sure if it works for exome-seq.

This paper seems to be able to find fusion genes from exome-seq. I wonder what software they use to do that

http://www.ncbi.nlm.nih.gov/pubmed/23313954
Sorry to bring back such an old post, but I went through a little hassle to figure it out and I think it might be useful for others:

They used dRanger (not publicly available) and Breakpointer.
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