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Old 10-03-2019, 08:12 AM   #2
SylvainM
Junior Member
 
Location: Limoges

Join Date: Feb 2019
Posts: 2
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Hi Fabien,

The "genus level only" correspond to reads that couldn't be identified deeper in the taxonomy.
So in fact it is not an addition of reads. You have to consider this as an other category of reads identification.

In your example, if you stop a the genus level you have to add the reads of the slash calls + acidificans + other species identified in the genus + sp + genus level only.
If you want to look at the species level, those reads will not enter in your datas as it stopped at the genus level.

Hope I have been clear enough.

Sincerely,

Sylvain
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