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Old 11-12-2013, 06:03 AM   #1
yimmieg
Junior Member
 
Location: Cambridge, MA

Join Date: Jan 2011
Posts: 3
Default Mitochondria contamination

Hi,

We are trying out the new ATAC-seq protocol:

http://www.nature.com/nmeth/journal/...meth.2688.html

and we are seeing a lot of mitochondria contamination. Does anyone have an ideas to how to get rid of this? It's > 60% of all reads. My thoughts are some old school biology (making biotin probes for the roughly 16k bases)?

~Jimmie
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