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Old 12-28-2011, 11:07 AM   #9
Location: USA

Join Date: Dec 2011
Posts: 10

I am having similar problem - any help would be greatly appreciated.

I am trying to index Homo_sapiens.GRCh37 ...fa file using the command

bwa index -p myGenome -a bwtsw /directory/myGenome.fa

but it keeps giving me the following error

[bwa_index] Pack FASTA... 56.76 sec
[bwa_index] Reverse the packed sequence... Segmentation fault

Can someone please help me with possible suggestion to fix this. Thank you.
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