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Old 07-17-2012, 10:45 AM   #2
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Location: Boston

Join Date: Oct 2010
Posts: 5

I am also very interested in the answer. At present, when I run cufflinks with bias correction, the program run terminates with an d error. However, when I use cuffdiff with bias correction on the cufflinks runs without bias correction, they work just fine.

So, is it sufficient to bias correct in cuffdiff rather than cufflinks ?
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