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Old 09-29-2014, 06:25 PM   #1
Junior Member
Location: Québec, Canada

Join Date: Sep 2014
Posts: 3
Arrow Comparative genomics

Hi everyone,
I begin a new study in comparative genomics between two strains from same species (a reference strain and a new one freshly assembled and annotated). I need to find all the differences between the two chromosomal sequences, except SNPs. Up to now, I have used ACT to visualize the genomic alignment and I have listed all the differences manually. I can say for now that the majority of differences are caused by movement of insertion sequences (ISs).

Now that I know the nature of the all differences between the two genomes, I want to use a web server to do the sames analyses that me, just to check the accuracy of my results
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