Thread: Tophat Run time
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Old 06-22-2010, 01:36 AM   #5
bassu
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Location: India

Join Date: Jun 2010
Posts: 5
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Thanks all,
@Rao: yes i am using RNA-seq data.

@mf_bill: thanks for your valuable comment, I was wondering whether my system configuration was right ? Even though BWT, tophat will produce huge tmp files.. it will get deleted automatically right?

@john_mu: Thanks john, currently i'm running my reads in a single thread. and my read length is 50bp.
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