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Old 12-07-2016, 04:58 AM   #10
GenoMax
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Location: East Coast USA

Join Date: Feb 2008
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Quote:
Originally Posted by Markiyan View Post
OK, so in order to cluster aminoacid sequences with current clumpify version it means:
1. parse fasta, reverse translate to DNA. Using a single codon for each aminoacid;
2. save as nt fastq;
3. clumpify;
4. parse fastq, translate;
5. save as aa fasta.
Or you could just use CD-HIT.
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