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Old 06-22-2016, 01:49 AM   #3
SylvainL
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Location: Geneva

Join Date: Feb 2012
Posts: 179
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Hi, it's an old thread but I have a comment...

I had to re-run the same pipeline on the same ChIPseqs using actually the ENCODE guideline and I am facing something I didn't expect: I do not get the same results! Not by far but still different. Did you experience that? Can it be due to the idr step?
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