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Old 02-24-2012, 05:14 AM   #1
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Default differential expression analysis of microrna generated by NGS platform

Hi all,
I am very much new to this NGS technology. I have already used cufflinks for transcriptome analysis as a small project. But now I am looking to get differential expression analysis of microRNA single ended reads. So my question is will it be reasonable to use cufflinks on this data too?
If not so, kindly can I get some explanation for the same.

Hoping to get response soon.

thanks all.
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