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Old 09-07-2017, 11:43 AM   #2
aprice67
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Location: New York

Join Date: Nov 2012
Posts: 49
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Hi,

I have a script that does that from my PhD days. I actually used this for some RNA secondary structure projects, so it looks like you're working on something similar.

https://github.com/price0416/scripts...llbam2depth.py

Disclaimer: I wrote this like 4 years ago and don't remember exactly all the details of it, so be sure to examine the code for yourself, it's not very long.

Hope this helps!

Last edited by aprice67; 09-07-2017 at 11:44 AM. Reason: spelling
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