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Old 12-11-2013, 02:23 AM   #7
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Location: Israel

Join Date: Dec 2013
Posts: 2

Thanks for the answer this sounds helpful
Originally Posted by sparks View Post
Use Novoalign or split your PacBio reads into multiple indexes.
Is it possible to use LSC pipeline in a way that it will split the data into multiple chunks, index them separately with e.g bowtie and then perform the alignment?
Thanks a lot for the help!
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