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Old 08-07-2013, 07:00 PM   #3
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Location: Ottawa

Join Date: Apr 2011
Posts: 130

Since these are all the same species, and just isolates, should I use a strict molecular clock?

Also, does anyone else have experience with heterozygous (50/50) sites in your reference? Is it a good idea to remove them before trying to reconstruct strain relationship?

Thanks you!
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