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Old 08-02-2011, 01:15 AM   #4
NicoBxl
not just another member
 
Location: Belgium

Join Date: Aug 2010
Posts: 264
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is this bedtools command correct ?


intersectBed -abam alignment.bam -b coordinates.gff > alignment_filtered.bam

Thanks,

N.

EDIT > I found it : intersectBed -abam alignment.bam -b coordinates.gff -wa > alignment_filtered.bam

Last edited by NicoBxl; 08-02-2011 at 05:47 AM.
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