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Old 01-27-2014, 03:38 AM   #10
Location: Europe

Join Date: Sep 2012
Posts: 39

I have been analysing illumina-based human Chip-exo data for a while - in my experience, the results are very TF-dependant.

At best, results (in terms of peak resolution and SN ratio) are almost within quoted specs.

At worst, results are comparable to ChIP-seq, with the added complication that a proper analysis will be lengthier (most off-the-shelf ChIP-seq analysis techniques will not work properly with ChIP-exo).

Last edited by albireo; 01-27-2014 at 03:41 AM.
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