Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • SAMMate 2.4 release

    Recently, we released SAMMate 2.4 on Sourceforge.net.
    We added some new features and made many enhancements.
    You can download it from the below link:


    New features:
    . Support BAM format;
    . SAM/BAM format conversion;
    . SAM/BAM file sorting;
    . Users can now configure Output file names;

    Enhancements:
    . Changed a confusing icon;
    . Changed the current path display;
    . Changed the suffix of output file names;
    . Added a help contents button on the menu;
    . Added a progress bar;
    . Added a file selection dialogue;
    . Updated the manual;

  • #2
    This looks great. However, your software is only available for Mac and Windows users. Can you make the source available to us Linux users?

    Comment


    • #3
      Thank you for using SAMMate!

      We are planning to make the software available to Linux users, but the release date has not been decided yet. Once the Linux version is ready, I will let you know.

      Comment


      • #4
        Hi xuguorong,
        I installed SMMAte 2.4 on Windows xp machine when I tried to launch the program I get a message saying SAMMAte encountered a problem and needs to close. There may be a bug. Could please you look into it.

        Comment


        • #5
          Hi Balat,
          I do have the same problem "SAMMate.exe has encountered a problem and needs to close. We are sorry for the inconvenience." did you fix it???
          Thanks

          Comment


          • #6
            Hi Balat and Bioinfo,

            I am sorry for this bug on Win XP machine!
            We met this kind of problem on Win XP machine before and it was caused by some .dll files missing on Win XP OS. But these .dll files are included in Win vista and 7 by default, so SAMMate does not have such problem on Win Vista and 7.

            I will try to fix this problem soon and let you know.
            Thank you for using SAMMate!

            Comment


            • #7
              DLLs

              Hello Xuguorong,

              This programs looks very useful and we would love to have Linux version but in the meantime, could you point us to a location for the missing DLLs and where to install them while you work on a fix?

              -Jack

              Comment


              • #8
                Hi Jack,

                I am sorry for late response!

                We have released SAMMate 2.4.1 and we have fixed some bugs including the WinXP problem. Now, you can download SAMMate for WinXP from


                We are planning to probably release Linux version in SAMMate 2.5.

                If you have any problem, please let me know.
                Thanks for using SAMMate!
                Last edited by xuguorong; 11-19-2010, 11:17 AM.

                Comment

                Latest Articles

                Collapse

                • seqadmin
                  Strategies for Sequencing Challenging Samples
                  by seqadmin


                  Despite advancements in sequencing platforms and related sample preparation technologies, certain sample types continue to present significant challenges that can compromise sequencing results. Pedro Echave, Senior Manager of the Global Business Segment at Revvity, explained that the success of a sequencing experiment ultimately depends on the amount and integrity of the nucleic acid template (RNA or DNA) obtained from a sample. “The better the quality of the nucleic acid isolated...
                  03-22-2024, 06:39 AM
                • seqadmin
                  Techniques and Challenges in Conservation Genomics
                  by seqadmin



                  The field of conservation genomics centers on applying genomics technologies in support of conservation efforts and the preservation of biodiversity. This article features interviews with two researchers who showcase their innovative work and highlight the current state and future of conservation genomics.

                  Avian Conservation
                  Matthew DeSaix, a recent doctoral graduate from Kristen Ruegg’s lab at The University of Colorado, shared that most of his research...
                  03-08-2024, 10:41 AM

                ad_right_rmr

                Collapse

                News

                Collapse

                Topics Statistics Last Post
                Started by seqadmin, Yesterday, 06:37 PM
                0 responses
                10 views
                0 likes
                Last Post seqadmin  
                Started by seqadmin, Yesterday, 06:07 PM
                0 responses
                9 views
                0 likes
                Last Post seqadmin  
                Started by seqadmin, 03-22-2024, 10:03 AM
                0 responses
                49 views
                0 likes
                Last Post seqadmin  
                Started by seqadmin, 03-21-2024, 07:32 AM
                0 responses
                67 views
                0 likes
                Last Post seqadmin  
                Working...
                X