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Old 06-10-2020, 08:46 AM   #3
NotGraysonFord
Junior Member
 
Location: Somewhere in UK

Join Date: Jun 2020
Posts: 3
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Thank you for replying so fast.

this is the error I had when I used Kai's ncbi genome downloader and I didn't understand it to say the least :P

Traceback (most recent call last):
File "c:\users\g\appdata\local\programs\python\python38-32\lib\multiprocessing\pool.py", line 125, in worker
result = (True, func(*args, **kwds))
File "c:\users\g\appdata\local\programs\python\python38-32\lib\site-packages\ncbi_genome_download\core.py", line 385, in downloadjob_creator_caller
return create_downloadjob(*args)
File "c:\users\g\appdata\local\programs\python\python38-32\lib\site-packages\ncbi_genome_download\core.py", line 397, in create_downloadjob
checksums = grab_checksums_file(entry)
File "c:\users\g\appdata\local\programs\python\python38-32\lib\site-packages\ncbi_genome_download\core.py", line 465, in grab_checksums_file
req = requests.get(full_url)
File "c:\users\g\appdata\local\programs\python\python38-32\lib\site-packages\requests\api.py", line 76, in get
return request('get', url, params=params, **kwargs)
File "c:\users\g\appdata\local\programs\python\python38-32\lib\site-packages\requests\api.py", line 61, in request
return session.request(method=method, url=url, **kwargs)
File "c:\users\g\appdata\local\programs\python\python38-32\lib\site-packages\requests\sessions.py", line 516, in request
prep = self.prepare_request(req)
File "c:\users\g\appdata\local\programs\python\python38-32\lib\site-packages\requests\sessions.py", line 449, in prepare_request
p.prepare(
File "c:\users\g\appdata\local\programs\python\python38-32\lib\site-packages\requests\models.py", line 314, in prepare
self.prepare_url(url, params)
File "c:\users\g\appdata\local\programs\python\python38-32\lib\site-packages\requests\models.py", line 388, in prepare_url
raise MissingSchema(error)
requests.exceptions.MissingSchema: Invalid URL 'na/md5checksums.txt': No schema supplied. Perhaps you meant http://na/md5checksums.txt?

I will try and do the download the ncbi website in gbff format too and see if the multigeneblast program accepts it
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