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Old 11-15-2009, 08:05 PM   #225
apfejes
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Location: Oakland, California

Join Date: Feb 2008
Posts: 236
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Depends what you're trying to do - I've used Vancouver Short Read Analysis Package/FindPeaks (my own software) for RNA-Seq (alternative exon expression) and had good luck - I don't use it in windows, myself, but java is cross-platform and I know people have successfully used in that environment.
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