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Old 06-21-2010, 07:51 AM   #1
Location: tx

Join Date: Dec 2009
Posts: 46
Default map solid reads to ncRNA database


I'm interested in mapping solid reads to a database of non-coding RNAs (miRNA etc).

If I could convert the color-space data to DNA sequence I would consider using blat or blast.
Does a tool exist for conversion color-space->DNA?

Any suggestions for a good mapping tool/strategy for this?
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