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Old 02-02-2017, 12:54 AM   #5
robertacarraro01
Junior Member
 
Location: Italy

Join Date: Feb 2017
Posts: 1
Default Bisulfighter for mapping of bisulfite-converted reads

Hi everyone!
I am trying to use Bisulfighter instead of Bismark for mapping and mc detection of bisulfite-converted samples. I used bsf-call and all seems ok apparently, the mapping works. But then, when parsing the .maf file produced, It tells "ERROR Exception has occured". Does anyone have an idea of what could be the problem? Second question, does anyone have an idea of what is the meaning of the "blocks" into the .maf file?
Really thank you.
Roberta
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