View Single Post
Old 08-05-2019, 10:28 AM   #238
GenoMax
Senior Member
 
Location: East Coast USA

Join Date: Feb 2008
Posts: 6,978
Default

BBMap is not designed to work with protein data. You will have to find a different tool.

Take a look at blat from UCSC's Jim Kent. That should produce the stats in parse-able tab-delimited columner format. You will need to do post-processing to get the table you are looking for.
GenoMax is offline   Reply With Quote