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Old 10-12-2012, 12:00 AM   #4
Location: Germany

Join Date: Mar 2010
Posts: 33

I know but some people take +- 100 or 200 bases as on target and some don't. Anyway 30% is very low, should be more towards >95% bases covered. We also used V3 and had +- 98%. Illumina performs slightly less with +- 92%.
How deep did you sequence?
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