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Old 07-03-2015, 03:48 PM   #1
friducha
Junior Member
 
Location: UK

Join Date: Jan 2015
Posts: 9
Default Start analysis from DESeq2-normalized read counts?

Hi all,

I know that DESeq2 relies on using raw read countsd as input. However, I have the following question:

What if the read counts were already normalized using DESeq2? Is there a way to start the analysis after this step?

A colleague did an initial DESeq2 run on our data, and supplied a table with the normalized read counts from DESEq. I do not have the raw counts, and was wondering if I could start from here and skip the normalization method that DESeq perfoms.
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