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Old 11-24-2016, 04:45 PM   #102
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Location: UK

Join Date: Apr 2015
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Default NextSeq suitable for allele-specific analysis?

Originally Posted by Brian Bushnell View Post
If the cost is reasonably similar, I'd go with HiSeq 2000. But perhaps you can get a sample of NextSeq data for your project, on a library you already ran on the HiSeq, to compare without committing yourself?
Thank you for reply! I would do the same but with NextSeq we are getting data within a week as we have direct access and with HiSeq2000 in the sequencing core one need to wait in many cases more than a month. I guess we will need to go for sequencing the same library on both libraries as you suggested as well.
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