Hey everybody,
In the IsotigsLayout file I found following:
Why are there 4 contigs listed in isogroup 514, but just two are in an isotig? Looking in the Isotig.fna I found >isotig02514 followed by >contig03234. So I expected >contig12018 to be next, but the next entry was the next isotig from isogroup00515. And as you can see contig15180 also doesn't match the isotig. Any hints?
cheers,
Thomas
In the IsotigsLayout file I found following:
PHP Code:
>isogroup00514 numIsotigs=1 numContigs=4
Length : 1060 677 177 71 (bp)
Contig : 10265 03234 12018 15110 Total:
isotig02514 >>>>> >>>>> 1131
>isogroup00515 numIsotigs=1 numContigs=4
Length : 129 1 23 524 (bp)
Contig : 11894 15180 08389 02141 Total:
isotig02515 >>>>> <<<<< >>>>> 676
>isogroup00516
cheers,
Thomas
Comment