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Old 09-09-2015, 12:54 AM   #25
Brian Bushnell
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Location: Walnut Creek, CA

Join Date: Jan 2014
Posts: 2,707
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Hi Luc,

It's quite possible that you are not misinterpreting anything, but the results are incorrect. Would you mind giving the exact parameters and version (I assume 35.43) you used? I will probably be able to replicate the bug without your specific data.

Thanks,
Brian

P.S. By the way, "mapPacBio.sh" will use approximately the same algorithm but only shred them into 6000bp shreds.

Last edited by Brian Bushnell; 09-09-2015 at 12:57 AM.
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