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Old 08-23-2013, 01:35 PM   #8
crazyhottommy
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Location: Gainesville

Join Date: Apr 2012
Posts: 140
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Quote:
Originally Posted by crazyhottommy View Post
The same code worked for pheatmap but still gave me error if I use heatmap.2
heatmap.2(m1, col=hmcols, breaks = bk, Colv=FALSE, dendrogram="row", symkey=FALSE, symm=F, symbreaks=T, scale="none", trace="none", labRow=NA, labCol=NA)
Error in heatmap.2(m1, col = hmcols, breaks = bk, Colv = FALSE, dendrogram = "row", :
lazy-load database 'P' is corrupt
In addition: Warning messages:
1: In heatmap.2(m1, col = hmcols, breaks = bk, Colv = FALSE, dendrogram = "row", :
restarting interrupted promise evaluation
2: In heatmap.2(m1, col = hmcols, breaks = bk, Colv = FALSE, dendrogram = "row", :
internal error -3 in R_decompress1

why is that? the error message is kind of mysterious...
I think it is just my R setting problem, though I do not know exactly what's the problem.
I tried the same code with heatmap.2 in the HPC computing cluster, it worked fine.

Sorry to bother you...
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