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Old 09-24-2010, 06:18 PM   #36
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Originally Posted by rzhuo View Post
Hi there,

I have a question about the software I can use to analyze the Illumina sequencing data. I'm doing targeted resequencing of long PCR fragments to find some EMS mutations. I'm waiting for my run to finish right now and meanwhile I'm looking for a suitable software. Any suggestion would be of great help to me. Thank you.
Probably north of 95% is still perfectly applicable. The only major changes are to the chemistry robustness which increases yield and readlengths. I don't personally run any form of ILMN machine so I welcome correction from an Illumaniac*.

*New name for the Illumina forum!
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