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Old 10-06-2011, 11:59 AM   #1
ps376
Junior Member
 
Location: New York

Join Date: Oct 2011
Posts: 4
Default Copy number analysis using 454 data

Hi,

I am pretty new to sequence analysis in general, but I was wondering if anyone know how to identify amplifications and deletions from 454 sequencing data? Intuitively, I would feel the coverage or read depth would indicate read depth (not sure about amplifications). But I'm not sure if this is the best way to go about it. Does anyone have any experience with this?

Thanks!
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