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Old 11-10-2011, 03:27 AM   #5
Location: Seoul, South Korea

Join Date: Oct 2011
Posts: 30

@ Chipper

Yes, I also agree using picard MergeSam instead of samtools merge.

However I found a case that picard MergeSam doesn't take many inputs (500 inputs) when options are default.

So in that case I used samtools merge (the files were split; they ought to have the same header).
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