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Old 04-16-2012, 03:38 AM   #3
msalm
Junior Member
 
Location: London

Join Date: Apr 2012
Posts: 3
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Hi there,

some options are:

ExomeCNV
http://bioinformatics.oxfordjournals...7/19/2648.full

VarScan2
http://genome.cshlp.org/content/earl....full.pdf+html

Control-FREEC
http://www.ncbi.nlm.nih.gov/pubmed/22155870

ExomeCopy
http://www.degruyter.com/view/j/sagm...xml?format=INT

CONTRA
http://www.ncbi.nlm.nih.gov/pubmed/22474122

cn.mops
http://nar.oxfordjournals.org/conten...abstract?ct=ct

Hope this helps!
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