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Old 11-24-2011, 02:34 AM   #18
Location: Leuven, Belgium

Join Date: Jan 2010
Posts: 17
Default CNV-seq ref.hits file?


I am analyzing CNVs for the first time or rather new to CNV-seq. Manual is pretty clear but i have one very basic doubt. I have my .bam file for which i can generate my.hits file as well using samtools. BUT from where do i get this ref.hits file. I have only one .bam file thats it which i would be using for my.hits file.. Some guidance?
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