SEQanswers - View Single Post - Single-cell RNA-seq with ERCC RNA Spike-In

ostolop · 12-31-2015, 04:55 AM

Hi!

This is a bit off-topic, and somewhat blatant self-advertising, but for what it's worth, we developed a method -- preparing it for publication, draft going on biorxiv soon -- to deal with single cell RNA-seq without ERCC spike-ins.

Here's some info on it http://genestack.com/single-cell-rnaseq/ and a bit more here https://genestack.com/blog/2014/09/2...ysis-tutorial/.

The method is available on Genestack.

--Misha
P.S. I'm the founder of Genestack, happy to answer questions etc.

12-31-2015, 04:55 AM	#2
ostolop Junior Member Location: UK Join Date: Nov 2011 Posts: 2	Single cell RNA-Seq without ERCC spike-ins Hi! This is a bit off-topic, and somewhat blatant self-advertising, but for what it's worth, we developed a method -- preparing it for publication, draft going on biorxiv soon -- to deal with single cell RNA-seq without ERCC spike-ins. Here's some info on it http://genestack.com/single-cell-rnaseq/ and a bit more here https://genestack.com/blog/2014/09/2...ysis-tutorial/. The method is available on Genestack. --Misha P.S. I'm the founder of Genestack, happy to answer questions etc.