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colindaven · 05-08-2019, 06:58 AM

You're right, these full VCFs are rare. I think a lot of the problems are due to data privacy. You can get them from the TCGA archive but that takes a lot of time to gain access.

I don't do a lot in this area but you might look at this small open set:

https://www.nature.com/articles/sdata201610

05-08-2019, 06:58 AM	#2
colindaven Senior Member Location: Germany Join Date: Oct 2008 Posts: 415	You're right, these full VCFs are rare. I think a lot of the problems are due to data privacy. You can get them from the TCGA archive but that takes a lot of time to gain access. I don't do a lot in this area but you might look at this small open set: https://www.nature.com/articles/sdata201610