SEQanswers - View Single Post - How to incorporate the reference into SNP tree

themerlin · 08-10-2013, 12:52 PM

Victor,

If you are doing a SNP analysis against a reference, just include your reference as an external genome, as well as the reference, and it should be processed with the rest of your external genomes and show up in your tree.

Jason

08-10-2013, 12:52 PM	#5
themerlin Member Location: Flagstaff, AZ Join Date: Feb 2010 Posts: 51	Victor, If you are doing a SNP analysis against a reference, just include your reference as an external genome, as well as the reference, and it should be processed with the rest of your external genomes and show up in your tree. Jason