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kopi-o · 02-01-2013, 05:42 AM

The files are surely not too big to parse with perl (for your purposes) if you do it right - you only need to have four lines at a time (or maybe just one) in memory. Also it might be a good opportunity to learn some BioPerl :-)

02-01-2013, 05:42 AM	#4
kopi-o Senior Member Location: Stockholm, Sweden Join Date: Feb 2008 Posts: 319	The files are surely not too big to parse with perl (for your purposes) if you do it right - you only need to have four lines at a time (or maybe just one) in memory. Also it might be a good opportunity to learn some BioPerl :-)