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Old 10-27-2015, 08:57 AM   #4
Junior Member
Location: United States-NJ

Join Date: Jul 2015
Posts: 6

Hi all,
I mapped my RNA-seq reads using edgeR and got around 90% of mapping, but when I entered the feature count commands I got only 70% successfully assigned reads. Does any one have an idea?
Note: I have 18 samples, 3 per group. I did single end read sequencing.

Any help would be appreciated
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