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Old 01-14-2016, 03:20 AM   #2
GenoMax
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Location: East Coast USA

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genomecov (http://bedtools.readthedocs.org/en/l...genomecov.html) or coveragebed (http://bedtools.readthedocs.org/en/l.../coverage.html) tools from Bedtools package can do this operation. You can find graphical representation of what needs to be done (since you want to write your own code) at those links.

Last edited by GenoMax; 01-14-2016 at 03:22 AM.
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