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Old 08-22-2016, 10:45 PM   #2
JakobHedegaard
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Location: Aarhus, Denmark

Join Date: Mar 2008
Posts: 54
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Hi, thank you very much for sharing this.
I have made a simple and a bit rough R-script (attached) to compare two list of indexes and return a similarity matrix, which can be used to select index combination with at least 3 bases difference.
Presently I am trying to implement a "base-balance check" to verify the G/T vs A/C balance. Are you considering to implement this in your tool?
Another nice add-on to your tool would be the possibility to upload lists of indexes.
Cheers,
/Jakob
Attached Files
File Type: txt compare_index_R.txt (7.6 KB, 47 views)
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